PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS539336.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 265aa    MW: 29580.1 Da    PI: 8.2215
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS539336.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.8e-13106155455
                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   +h e Er+RR+++   f+ Lr llP       ++K s ++i+ +Av+YIk++q
  EcS539336.10 106 THRETERQRRQEMAAHFQSLRLLLPLeY---LKGKRSMSDIVYEAVKYIKDMQ 155
                   8*************************77...9*******************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.98E-1599174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.54E-5100159No hitNo description
PROSITE profilePS5088813.579102154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-12104171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-10106155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-6108160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDPNASTIPS DETEDQVLQS ASSTPSHKDD ELLVIAAQQM NHTSSTAPSD ETEDQVSQSA  60
SPLSMIASSQ YGLDLTDRPD YRRWRNSGLS RRDLEKTSPK GEKKFTHRET ERQRRQEMAA  120
HFQSLRLLLP LEYLKGKRSM SDIVYEAVKY IKDMQSKIQK LSDKRDEIKK SESPNSHGTD  180
TSNRLACPSS SSSSSSSGPK NIVIVKSYKR GVEVAISTEP EQGMPLRRVL EVLTGDGLDL  240
INCTSTKVKG RLIHRIESEV VPRTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055576.11e-170PREDICTED: transcription factor bHLH120-like
TrEMBLA0A059C1241e-169A0A059C124_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3488122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-25bHLH family protein